widdowquinn / pyani
Showing 1 of 1 files from the diff.

@@ -194,7 +194,7 @@
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    for fmt in outfmts:
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        outfname = Path(args.outdir) / f"distribution_{matdata.name}_run{run_id}.{fmt}"
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        logger.debug("\tWriting graphics to %s", outfname)
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        DISTMETHODS[args.method[0]](
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        DISTMETHODS[args.method](
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            matdata.data,
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            outfname,
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            matdata.name,
@@ -227,12 +227,13 @@
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    logger.info("Writing %s matrix heatmaps", matdata.name)
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    cmap = pyani_config.get_colormap(matdata.data, matdata.name)
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    for fmt in outfmts:
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        outfname = Path(args.outdir) / f"matrix_{matdata.name}_run{run_id}.{fmt}"
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        outfname = (
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            Path(args.outdir) / f"matrix_{matdata.name}_run{run_id}_{args.method}.{fmt}"
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        )
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        logger.debug("\tWriting graphics to %s", outfname)
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        params = pyani_graphics.Params(cmap, result_labels, result_classes)
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        # Draw heatmap
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        _, newicks = GMETHODS[args.method](
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            matdata.data,
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            outfname,
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            title=f"matrix_{matdata.name}_run{run_id}",
@@ -281,7 +282,7 @@
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        logger.debug("\tWriting graphics to %s", outfname)
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        params = pyani_graphics.Params(cmap, result_labels, result_classes)
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        # Draw scatterplot
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        SMETHODS[args.method[0]](
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        SMETHODS[args.method](
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            matdata1.data,
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            matdata2.data,
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            outfname,
Files Coverage
pyani 74.48%
Project Totals (58 files) 74.48%
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  layout: "header, diff"
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