scripts/subcommands/subcmd_anim.py
scripts/subcommands/subcmd_download.py
scripts/subcommands/subcmd_anib.py
scripts/subcommands/subcmd_report.py
scripts/subcommands/subcmd_plot.py
scripts/subcommands/subcmd_classify.py
scripts/subcommands/subcmd_index.py
scripts/subcommands/subcmd_listdeps.py
scripts/subcommands/subcmd_createdb.py
scripts/subcommands/__init__.py
scripts/subcommands/subcmd_aniblastall.py
scripts/genbank_get_genomes_by_taxon.py
scripts/average_nucleotide_identity.py
scripts/parsers/__init__.py
scripts/parsers/download_parser.py
scripts/parsers/anim_parser.py
scripts/parsers/report_parser.py
scripts/parsers/classify_parser.py
scripts/parsers/anib_parser.py
scripts/parsers/plot_parser.py
scripts/parsers/common_parser.py
scripts/parsers/index_parser.py
scripts/parsers/createdb_parser.py
scripts/parsers/run_common_parser.py
scripts/parsers/scheduling_parser.py
scripts/parsers/aniblastall_parser.py
scripts/parsers/listdeps_parser.py
scripts/pyani_script.py
scripts/__init__.py
scripts/delta_filter_wrapper.py
pyani_graphics/mpl/__init__.py
pyani_graphics/sns/__init__.py
pyani_graphics/__init__.py
pyani_orm.py
download.py
anib.py
nucmer.py
run_sge.py
anim.py
pyani_tools.py
pyani_jobs.py
pyani_files.py
tetra.py
pyani_report.py
pyani_classify.py
logger.py
run_multiprocessing.py
pyani_config.py
aniblastall.py
dependencies.py
blast.py
__init__.py