R/calc_summary_stats.R
R/calc_act.R
R/parse_beast_trees.R
R/parse_beast_posterior.R
R/is_trees_file.R
R/calc_esses.R
R/parse_beast_state.R
R/extract_operators_lines.R
R/calc_hpd_interval.R
R/save_beast_estimates.R
R/parse_beast_tracelog_file.R
R/remove_burn_ins.R
R/remove_burn_in.R
R/count_trees_in_file.R
R/parse_beast_log.R
R/calc_ess.R
R/cs_std_dev.R
R/save_beast_trees.R
R/calc_mode.R
R/is_posterior.R
R/parse_beast_output_files.R
R/get_path.R
R/get_tracerer_tempfilename.R
R/get_paths.R
R/check_trace.R
R/calc_geom_mean.R
R/calc_stderr_mean.R
R/is_trees_posterior.R
src/calc_act_cpp.cpp
src/calc_std_error_of_mean_cpp.cpp