Commit ⋅ ropensci/rgbif

Showing 2 of 6 files from the diff.

79.14% 100.00% +0.06%

R/zzz.r changed.

77.36% 85.71% -1.81%

R/occ_download_meta.R changed.

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tests/testthat/test-occ_download_meta.R has changed.

tests/fixtures/occ_download_meta_na_results.yml is new.

DESCRIPTION has changed.

tests/fixtures/occ_download_meta_with_results.yml is new.

@@ -697,3 +697,5 @@

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697	697		f <- match.fun(f)
698	698		function(...) tryDefault(f(...), default, quiet = quiet)
699	699		}
	700	+
	701	+	cat_n <- function(..., sep = "") cat(..., "\n", sep = sep)

@@ -32,15 +32,28 @@

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#' @export
print.occ_download_meta <- function(x, ...){
  stopifnot(inherits(x, 'occ_download_meta'))
  cat("<<gbif download metadata>>", "\n", sep = "")
  cat("  Status: ", x$status, "\n", sep = "")
  cat("  Format: ", attr(x, 'format'), "\n", sep = "")
  cat("  Download key: ", x$key, "\n", sep = "")
  cat("  Created: ", x$created, "\n", sep = "")
  cat("  Modified: ", x$modified, "\n", sep = "")
  cat("  Download link: ", x$downloadLink, "\n", sep = "")
  cat("  Total records: ", x$totalRecords, "\n", sep = "")
  cat("  Request: ", gbif_make_list(x$request), "\n", sep = "")
  cat_n("<<gbif download metadata>>")
  cat_n("  Status: ", x$status)
  cat_n("  Format: ", attr(x, 'format'))
  cat_n("  Download key: ", x$key)
  cat_n("  Created: ", x$created)
  cat_n("  Modified: ", x$modified)
  cat_n("  Download link: ", x$downloadLink)
  cat_n("  Total records: ", n_with_status(x$totalRecords, x$status))
  cat_n("  Request: ", gbif_make_list(x$request))
}

n_with_status <- function(n, status) {
  # bail out if not numeric or integer
  if (!inherits(n, c("numeric", "integer"))) return(n)
  # return n if greater than zero
  if (n > 0) return(n)
  # if zero and still running return NA
  if (!tolower(status) %in% c('succeeded', 'killed', 'cancelled')) {
    return("<NA>")
  }
  # else return n
  return(n)
}

gbif_make_list <- function(y){

@@ -74,12 +87,6 @@

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          tmp$type,
          if ("geometry" %in% names(tmp)) "geometry" else tmp$key,
          sub_str(gg, 60)
          # if ("geometry" %in% names(tmp)) {
          #   tmp$geometry
          # } else {
          #   zz <- tmp$value %||% tmp$values
          #   if (!is.null(zz)) paste(zz, collapse = ",") else zz
          # }
        )
      }
    }

Files		•	•	•	Coverage
R	2,330	1,777	0	553	76.27%
Project Totals (55 files)	2,330	1,777	0	553	76.27%

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32	32		#' @export
33	33		print.occ_download_meta <- function(x, ...){
34	34		stopifnot(inherits(x, 'occ_download_meta'))
35		-	cat("<<gbif download metadata>>", "\n", sep = "")
36		-	cat(" Status: ", x$status, "\n", sep = "")
37		-	cat(" Format: ", attr(x, 'format'), "\n", sep = "")
38		-	cat(" Download key: ", x$key, "\n", sep = "")
39		-	cat(" Created: ", x$created, "\n", sep = "")
40		-	cat(" Modified: ", x$modified, "\n", sep = "")
41		-	cat(" Download link: ", x$downloadLink, "\n", sep = "")
42		-	cat(" Total records: ", x$totalRecords, "\n", sep = "")
43		-	cat(" Request: ", gbif_make_list(x$request), "\n", sep = "")
	35	+	cat_n("<<gbif download metadata>>")
	36	+	cat_n(" Status: ", x$status)
	37	+	cat_n(" Format: ", attr(x, 'format'))
	38	+	cat_n(" Download key: ", x$key)
	39	+	cat_n(" Created: ", x$created)
	40	+	cat_n(" Modified: ", x$modified)
	41	+	cat_n(" Download link: ", x$downloadLink)
	42	+	cat_n(" Total records: ", n_with_status(x$totalRecords, x$status))
	43	+	cat_n(" Request: ", gbif_make_list(x$request))
	44	+	}
	45	+
	46	+	n_with_status <- function(n, status) {
	47	+	# bail out if not numeric or integer
	48	+	if (!inherits(n, c("numeric", "integer"))) return(n)
	49	+	# return n if greater than zero
	50	+	if (n > 0) return(n)
	51	+	# if zero and still running return NA
	52	+	if (!tolower(status) %in% c('succeeded', 'killed', 'cancelled')) {
	53	+	return("<NA>")
	54	+	}
	55	+	# else return n
	56	+	return(n)
44	57		}
45	58
46	59		gbif_make_list <- function(y){

74	87		tmp$type,
75	88		if ("geometry" %in% names(tmp)) "geometry" else tmp$key,
76	89		sub_str(gg, 60)
77		-	# if ("geometry" %in% names(tmp)) {
78		-	# tmp$geometry
79		-	# } else {
80		-	# zz <- tmp$value %\|\|% tmp$values
81		-	# if (!is.null(zz)) paste(zz, collapse = ",") else zz
82		-	# }
83	90		)
84	91		}
85	92		}