Newly tracked file
R/ru_sampling_rcpp.R
changed.
Newly tracked file
R/ru_sampling.R
changed.
Other files ignored by Codecov
man/ru.Rd
has changed.
man/ru_rcpp.Rd
has changed.
59  59  #' and the returned value is \code{theta}. If \code{phi_to_theta} is 

60  60  #' undefined at the input value then the function should return \code{NA}. 

61  61  #' See \strong{Details}. 

62  +  #' If \code{lambda$phi_to_theta} (see argument \code{lambda} below) is 

63  +  #' supplied then this is used instead of any function supplied via 

64  +  #' \code{phi_to_theta}. 

62  65  #' @param log_j An external pointer to a compiled C++ function returning the 

63    #' log of the Jacobian of the transformation from \code{theta} (\eqn{\theta}) 

64    #' to \code{phi} (\eqn{\phi}), i.e., based on derivatives of \eqn{\phi} with 

65    #' respect to \eqn{\theta}. Takes \code{theta} as its argument. 

66  +  #' log of the Jacobian of the transformation from \code{theta} (\eqn{\theta}) 

67  +  #' to \code{phi} (\eqn{\phi}), i.e., based on derivatives of \eqn{\phi} with 

68  +  #' respect to \eqn{\theta}. Takes \code{theta} as its argument. 

69  +  #' If \code{lambda$log_j} (see argument \code{lambda} below) is 

70  +  #' supplied then this is used instead of any function supplied via 

71  +  #' \code{log_j}. 

66  72  #' @param user_args A list of numeric components. If \code{trans = ``user''} 

67  73  #' then \code{user_args} is a list providing arguments to the usersupplied 

68  74  #' functions \code{phi_to_theta} and \code{log_j}. 
47  47  #' The argument is \code{phi} and the returned value is \code{theta}. 

48  48  #' If \code{phi_to_theta} is undefined at the input value then the 

49  49  #' function should return \code{NA}. See \strong{Details}. 

50  +  #' If \code{lambda$phi_to_theta} (see argument \code{lambda} below) is 

51  +  #' supplied then this is used instead of any function supplied via 

52  +  #' \code{phi_to_theta}. 

50  53  #' @param log_j A function returning the log of the Jacobian of the 

51    #' transformation from \code{theta} (\eqn{\theta}) to \code{phi} (\eqn{\phi}), 

52    #' i.e., based on derivatives of \eqn{\phi} with respect to \eqn{\theta}. 

53    #' Takes \code{theta} as its argument. 

54  +  #' transformation from \code{theta} (\eqn{\theta}) to \code{phi} (\eqn{\phi}), 

55  +  #' i.e., based on derivatives of \eqn{\phi} with respect to \eqn{\theta}. 

56  +  #' Takes \code{theta} as its argument. 

57  +  #' If \code{lambda$log_j} (see argument \code{lambda} below) is 

58  +  #' supplied then this is used instead of any function supplied via 

59  +  #' \code{log_j}. 

54  60  #' @param user_args A list of numeric components. If \code{trans = "user"} 

55  61  #' then \code{user_args} is a list providing arguments to the usersupplied 

56  62  #' functions \code{phi_to_theta} and \code{log_j}. 
Files  Coverage 

R  62.90% 
src  82.38% 
inst/include/rust_RcppExports.h  0.00% 
Project Totals (12 files)  67.68% 