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        # If the file format is "pdb" using OEWriteMolecule() rearranges the atoms (hydrogens are pushed to the bottom)
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        # Issue #475 (https://github.com/openforcefield/openforcefield/issues/475)
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        # dfhahn's workaround: Using OEWritePDBFile does not alter the atom arrangement
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        if (file_format.lower() == "pdb"):
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        if file_format.lower() == "pdb":
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            if oemol.NumConfs() > 1:
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                for conf in oemol.GetConfs():
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                    oechem.OEWritePDBFile(ofs, conf, oechem.OEOFlavor_PDB_BONDS)
Files Coverage
openforcefield 86.55%
Project Totals (18 files) 86.55%
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# Codecov configuration to make it a bit less noisy
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