Files Coverage
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nipype/algorithms/__init__.py 100.00%
nipype/algorithms/confounds.py 67.18%
nipype/algorithms/icc.py 57.53%
nipype/algorithms/mesh.py 29.70%
nipype/algorithms/metrics.py 56.28%
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nipype/algorithms/modelgen.py 59.26%
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nipype/algorithms/stats.py 100.00%
nipype/caching/__init__.py 100.00%
nipype/caching/memory.py 57.38%
nipype/conftest.py 95.83%
nipype/info.py 78.46%
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nipype/interfaces/afni/model.py 86.93%
nipype/interfaces/afni/preprocess.py 81.80%
nipype/interfaces/afni/svm.py 97.62%
nipype/interfaces/afni/utils.py 81.87%
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nipype/interfaces/ants/legacy.py 66.67%
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nipype/interfaces/ants/resampling.py 84.78%
nipype/interfaces/ants/segmentation.py 76.52%
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nipype/interfaces/ants/visualization.py 87.76%
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nipype/interfaces/dipy/reconstruction.py 30.69%
nipype/interfaces/dipy/registration.py 83.33%
nipype/interfaces/dipy/setup.py 0.00%
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nipype/interfaces/dipy/stats.py 83.33%
nipype/interfaces/dipy/tensors.py 39.73%
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nipype/interfaces/dtitk/utils.py 92.52%
nipype/interfaces/dynamic_slicer.py 17.48%
nipype/interfaces/elastix/__init__.py 100.00%
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nipype/interfaces/elastix/registration.py 52.25%
nipype/interfaces/elastix/utils.py 28.40%
nipype/interfaces/freesurfer/__init__.py 100.00%
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nipype/interfaces/freesurfer/model.py 64.19%
nipype/interfaces/freesurfer/preprocess.py 65.68%
nipype/interfaces/freesurfer/registration.py 78.07%
nipype/interfaces/freesurfer/utils.py 63.26%
nipype/interfaces/fsl/__init__.py 100.00%
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nipype/interfaces/fsl/base.py 76.40%
nipype/interfaces/fsl/dti.py 65.67%
nipype/interfaces/fsl/epi.py 61.96%
nipype/interfaces/fsl/fix.py 63.48%
nipype/interfaces/fsl/maths.py 98.26%
nipype/interfaces/fsl/model.py 54.77%
nipype/interfaces/fsl/possum.py 100.00%
nipype/interfaces/fsl/preprocess.py 71.41%
nipype/interfaces/fsl/utils.py 63.76%
nipype/interfaces/image.py 73.42%
nipype/interfaces/io.py 55.24%
nipype/interfaces/matlab.py 74.23%
nipype/interfaces/meshfix.py 68.66%
nipype/interfaces/minc/__init__.py 100.00%
nipype/interfaces/minc/base.py 38.30%
nipype/interfaces/minc/minc.py 85.17%
nipype/interfaces/minc/testdata.py 100.00%
nipype/interfaces/mipav/__init__.py 100.00%
nipype/interfaces/mipav/developer.py 100.00%
nipype/interfaces/mipav/generate_classes.py 0.00%
nipype/interfaces/mixins/__init__.py 100.00%
nipype/interfaces/mixins/fixheader.py 100.00%
nipype/interfaces/mixins/reporting.py 47.06%
nipype/interfaces/mne/__init__.py 100.00%
nipype/interfaces/mne/base.py 49.12%
nipype/interfaces/mrtrix/__init__.py 100.00%
nipype/interfaces/mrtrix/convert.py 17.19%
nipype/interfaces/mrtrix/preprocess.py 63.87%
nipype/interfaces/mrtrix/tensors.py 65.79%
nipype/interfaces/mrtrix/tracking.py 89.72%
nipype/interfaces/mrtrix3/__init__.py 100.00%
nipype/interfaces/mrtrix3/base.py 57.41%
nipype/interfaces/mrtrix3/connectivity.py 71.26%
nipype/interfaces/mrtrix3/preprocess.py 85.29%
nipype/interfaces/mrtrix3/reconst.py 81.48%
nipype/interfaces/mrtrix3/tracking.py 89.47%
nipype/interfaces/mrtrix3/utils.py 83.62%
nipype/interfaces/niftyfit/__init__.py 100.00%
nipype/interfaces/niftyfit/asl.py 100.00%
nipype/interfaces/niftyfit/base.py 42.86%
nipype/interfaces/niftyfit/dwi.py 95.74%
nipype/interfaces/niftyfit/qt1.py 100.00%
nipype/interfaces/niftyreg/__init__.py 100.00%
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nipype/interfaces/niftyreg/reg.py 85.91%
nipype/interfaces/niftyreg/regutils.py 80.68%
nipype/interfaces/niftyseg/__init__.py 100.00%
nipype/interfaces/niftyseg/base.py 88.89%
nipype/interfaces/niftyseg/em.py 92.31%
nipype/interfaces/niftyseg/label_fusion.py 57.14%
nipype/interfaces/niftyseg/lesions.py 100.00%
nipype/interfaces/niftyseg/maths.py 77.53%
nipype/interfaces/niftyseg/patchmatch.py 100.00%
nipype/interfaces/niftyseg/stats.py 65.91%
nipype/interfaces/nilearn.py 96.61%
nipype/interfaces/nipy/__init__.py 100.00%
nipype/interfaces/nipy/base.py 100.00%
nipype/interfaces/nipy/model.py 24.62%
nipype/interfaces/nipy/preprocess.py 44.66%
nipype/interfaces/nipy/utils.py 56.76%
nipype/interfaces/nitime/__init__.py 100.00%
nipype/interfaces/nitime/analysis.py 77.42%
nipype/interfaces/nitime/base.py 100.00%
nipype/interfaces/petpvc.py 54.72%
nipype/interfaces/quickshear.py 100.00%
nipype/interfaces/semtools/__init__.py 100.00%
nipype/interfaces/semtools/brains/__init__.py 100.00%
nipype/interfaces/semtools/brains/classify.py 100.00%
nipype/interfaces/semtools/brains/segmentation.py 100.00%
nipype/interfaces/semtools/brains/utilities.py 100.00%
nipype/interfaces/semtools/converters.py 100.00%
nipype/interfaces/semtools/diffusion/__init__.py 100.00%
nipype/interfaces/semtools/diffusion/diffusion.py 100.00%
nipype/interfaces/semtools/diffusion/gtract.py 100.00%
nipype/interfaces/semtools/diffusion/maxcurvature.py 100.00%
nipype/interfaces/semtools/diffusion/tractography/__init__.py 100.00%
nipype/interfaces/semtools/diffusion/tractography/commandlineonly.py 100.00%
nipype/interfaces/semtools/diffusion/tractography/fiberprocess.py 100.00%
nipype/interfaces/semtools/diffusion/tractography/fibertrack.py 100.00%
nipype/interfaces/semtools/diffusion/tractography/ukftractography.py 100.00%
nipype/interfaces/semtools/featurecreator.py 100.00%
nipype/interfaces/semtools/filtering/__init__.py 100.00%
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nipype/interfaces/semtools/legacy/registration.py 100.00%
nipype/interfaces/semtools/registration/__init__.py 100.00%
nipype/interfaces/semtools/registration/brainsfit.py 100.00%
nipype/interfaces/semtools/registration/brainsresample.py 100.00%
nipype/interfaces/semtools/registration/brainsresize.py 100.00%
nipype/interfaces/semtools/registration/specialized.py 100.00%
nipype/interfaces/semtools/segmentation/__init__.py 100.00%
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nipype/interfaces/semtools/testing/__init__.py 100.00%
nipype/interfaces/semtools/testing/featuredetection.py 100.00%
nipype/interfaces/semtools/testing/generateaveragelmkfile.py 100.00%
nipype/interfaces/semtools/testing/landmarkscompare.py 100.00%
nipype/interfaces/semtools/utilities/__init__.py 100.00%
nipype/interfaces/semtools/utilities/brains.py 100.00%
nipype/interfaces/slicer/__init__.py 100.00%
nipype/interfaces/slicer/base.py 100.00%
nipype/interfaces/slicer/converters.py 100.00%
nipype/interfaces/slicer/diffusion/__init__.py 100.00%
nipype/interfaces/slicer/diffusion/diffusion.py 100.00%
nipype/interfaces/slicer/filtering/__init__.py 100.00%
nipype/interfaces/slicer/filtering/arithmetic.py 100.00%
nipype/interfaces/slicer/filtering/checkerboardfilter.py 100.00%
nipype/interfaces/slicer/filtering/denoising.py 100.00%
nipype/interfaces/slicer/filtering/extractskeleton.py 100.00%
nipype/interfaces/slicer/filtering/histogrammatching.py 100.00%
nipype/interfaces/slicer/filtering/imagelabelcombine.py 100.00%
nipype/interfaces/slicer/filtering/morphology.py 100.00%
nipype/interfaces/slicer/filtering/n4itkbiasfieldcorrection.py 100.00%
nipype/interfaces/slicer/filtering/resamplescalarvectordwivolume.py 100.00%
nipype/interfaces/slicer/filtering/thresholdscalarvolume.py 100.00%
nipype/interfaces/slicer/filtering/votingbinaryholefillingimagefilter.py 100.00%
nipype/interfaces/slicer/generate_classes.py 8.75%
nipype/interfaces/slicer/legacy/__init__.py 100.00%
nipype/interfaces/slicer/legacy/converters.py 100.00%
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nipype/interfaces/slicer/legacy/diffusion/denoising.py 100.00%
nipype/interfaces/slicer/legacy/filtering.py 100.00%
nipype/interfaces/slicer/legacy/registration.py 100.00%
nipype/interfaces/slicer/legacy/segmentation.py 100.00%
nipype/interfaces/slicer/quantification/__init__.py 100.00%
nipype/interfaces/slicer/quantification/changequantification.py 100.00%
...ipype/interfaces/slicer/quantification/petstandarduptakevaluecomputation.py 100.00%
nipype/interfaces/slicer/registration/__init__.py 100.00%
nipype/interfaces/slicer/registration/brainsfit.py 100.00%
nipype/interfaces/slicer/registration/brainsresample.py 100.00%
nipype/interfaces/slicer/registration/specialized.py 100.00%
nipype/interfaces/slicer/segmentation/__init__.py 100.00%
nipype/interfaces/slicer/segmentation/simpleregiongrowingsegmentation.py 100.00%
nipype/interfaces/slicer/segmentation/specialized.py 100.00%
nipype/interfaces/slicer/surface.py 100.00%
nipype/interfaces/slicer/utilities.py 100.00%
nipype/interfaces/spm/__init__.py 100.00%
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nipype/interfaces/spm/model.py 43.21%
nipype/interfaces/spm/preprocess.py 49.56%
nipype/interfaces/spm/utils.py 60.59%
nipype/interfaces/utility/__init__.py 100.00%
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nipype/interfaces/utility/csv.py 100.00%
nipype/interfaces/utility/wrappers.py 84.42%
nipype/interfaces/vista/__init__.py 100.00%
nipype/interfaces/vista/vista.py 100.00%
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nipype/interfaces/workbench/__init__.py 100.00%
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nipype/interfaces/workbench/metric.py 70.45%
nipype/pipeline/__init__.py 100.00%
nipype/pipeline/engine/__init__.py 100.00%
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nipype/pipeline/engine/nodes.py 78.16%
nipype/pipeline/engine/utils.py 74.49%
nipype/pipeline/engine/workflows.py 64.77%
nipype/pipeline/plugins/__init__.py 100.00%
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nipype/pipeline/plugins/condor.py 15.94%
nipype/pipeline/plugins/dagman.py 19.12%
nipype/pipeline/plugins/debug.py 86.67%
nipype/pipeline/plugins/ipython.py 20.45%
nipype/pipeline/plugins/legacymultiproc.py 65.35%
nipype/pipeline/plugins/linear.py 78.57%
nipype/pipeline/plugins/lsf.py 16.22%
nipype/pipeline/plugins/multiproc.py 78.79%
nipype/pipeline/plugins/oar.py 18.60%
nipype/pipeline/plugins/pbs.py 16.90%
nipype/pipeline/plugins/pbsgraph.py 25.00%
nipype/pipeline/plugins/semaphore_singleton.py 100.00%
nipype/pipeline/plugins/sge.py 17.83%
nipype/pipeline/plugins/sgegraph.py 11.49%
nipype/pipeline/plugins/slurm.py 13.25%
nipype/pipeline/plugins/slurmgraph.py 11.11%
nipype/pipeline/plugins/somaflow.py 40.00%
nipype/pipeline/plugins/tools.py 76.32%
nipype/pkg_info.py 75.00%
nipype/refs.py 100.00%
nipype/scripts/cli.py 42.17%
nipype/scripts/crash_files.py 16.67%
nipype/scripts/instance.py 56.25%
nipype/scripts/utils.py 25.32%
nipype/sphinxext/apidoc/__init__.py 28.21%
nipype/sphinxext/apidoc/docstring.py 16.00%
nipype/sphinxext/documenter.py 20.83%
nipype/sphinxext/gh.py 30.00%
nipype/sphinxext/plot_workflow.py 14.95%
nipype/testing/__init__.py 88.89%
nipype/testing/decorators.py 66.67%
nipype/testing/fixtures.py 98.61%
nipype/testing/utils.py 70.91%
nipype/utils/__init__.py 100.00%
nipype/utils/config.py 62.22%
nipype/utils/docparse.py 52.21%
nipype/utils/draw_gantt_chart.py 10.07%
nipype/utils/filemanip.py 71.46%
nipype/utils/functions.py 100.00%
nipype/utils/imagemanip.py 100.00%
nipype/utils/logger.py 84.62%
nipype/utils/matlabtools.py 70.59%
nipype/utils/misc.py 59.24%
nipype/utils/nipype2boutiques.py 51.95%
nipype/utils/nipype_cmd.py 40.68%
nipype/utils/onetime.py 84.62%
nipype/utils/profiler.py 17.92%
nipype/utils/provenance.py 55.16%
nipype/utils/spm_docs.py 68.00%
nipype/utils/subprocess.py 86.36%
nipype/utils/tmpdirs.py 45.83%
nipype/workflows/__init__.py 88.24%
Project Totals (302 files) 64.69%
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