lingpy / lingpy

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src/lingpy/compare/phylogeny.py src/lingpy/compare/strings.py src/lingpy/compare/lexstat.py src/lingpy/compare/partial.py src/lingpy/compare/_phylogeny/utils.py src/lingpy/compare/_phylogeny/polygon.py src/lingpy/compare/_phylogeny/convex_hull.py src/lingpy/compare/_phylogeny/_settings.py src/lingpy/compare/sanity.py src/lingpy/compare/_structure.py src/lingpy/compare/util.py src/lingpy/algorithm/cython/_calign.py src/lingpy/algorithm/cython/_talign.py src/lingpy/algorithm/cython/_malign.py src/lingpy/algorithm/cython/_cluster.py src/lingpy/algorithm/cython/_misc.py src/lingpy/algorithm/clustering.py src/lingpy/algorithm/_tree.py src/lingpy/algorithm/extra.py src/lingpy/algorithm/cluster_util.py src/lingpy/algorithm/__init__.py src/lingpy/align/multiple.py src/lingpy/align/sca.py src/lingpy/align/_align/confidence.py src/lingpy/align/pairwise.py src/lingpy/align/__init__.py src/lingpy/thirdparty/cogent/tree.py src/lingpy/thirdparty/cogent/newick.py src/lingpy/thirdparty/cogent/__init__.py src/lingpy/thirdparty/linkcomm/link_clustering.py src/lingpy/thirdparty/linkcomm/__init__.py src/lingpy/thirdparty/__init__.py src/lingpy/convert/plot.py src/lingpy/convert/html.py src/lingpy/convert/strings.py src/lingpy/convert/graph.py src/lingpy/convert/tree.py src/lingpy/convert/cldf.py src/lingpy/sequence/sound_classes.py src/lingpy/sequence/ngrams.py src/lingpy/sequence/smoothing.py src/lingpy/sequence/profile.py src/lingpy/sequence/generate.py src/lingpy/sequence/__init__.py src/lingpy/basic/wordlist.py src/lingpy/basic/ops.py src/lingpy/basic/parser.py src/lingpy/basic/tree.py src/lingpy/basic/__init__.py src/lingpy/evaluate/apa.py src/lingpy/evaluate/acd.py src/lingpy/evaluate/alr.py src/lingpy/evaluate/__init__.py src/lingpy/read/qlc.py src/lingpy/read/csv.py src/lingpy/read/starling.py src/lingpy/read/phylip.py src/lingpy/cli.py src/lingpy/data/derive.py src/lingpy/data/model.py src/lingpy/data/ipa/sampa.py src/lingpy/data/__init__.py src/lingpy/meaning/colexification.py src/lingpy/util.py src/lingpy/log.py src/lingpy/settings.py src/lingpy/basictypes.py src/lingpy/config.py src/lingpy/cache.py src/lingpy/__init__.py src/lingpy/_settings.py tests/compare/test_lexstat.py tests/compare/test_compare_strings.py tests/compare/test__phylogeny.py tests/compare/test_phylogeny.py tests/compare/test_partial.py tests/compare/test_sanity.py tests/compare/test__structure.py tests/sequence/test_sound_classes.py tests/sequence/test_ngrams.py tests/sequence/test_smoothing.py tests/sequence/test_generate.py tests/sequence/test_profile.py tests/algorithm/test_cython.py tests/algorithm/test_clustering.py tests/algorithm/test_extra.py tests/algorithm/test__tree.py tests/algorithm/test_cluster_util.py tests/convert/test_strings.py tests/convert/test_plot.py tests/convert/test_cldf_methods.py tests/convert/test_html.py tests/convert/test_cldf.py tests/convert/test_convert_tree.py tests/convert/test_graph.py tests/basic/test_wordlist.py tests/basic/test_ops.py tests/basic/test_parser.py tests/basic/test_tree.py tests/align/test_sca.py tests/align/test_multiple.py tests/align/test_pairwise.py tests/thirdparty/test_cogent.py tests/thirdparty/test_linkcomm.py tests/read/test_csv.py tests/read/test_qlc.py tests/read/test_phylip.py tests/read/test_starling.py tests/evaluate/test_acd.py tests/evaluate/test_apa.py tests/evaluate/test_alr.py tests/test_cli.py tests/test_util.py tests/meaning/test_colexification.py tests/test_basictypes.py tests/test_log.py tests/data/test_derive.py tests/data/test_sound_class_models.py tests/test_config.py tests/test_settings.py tests/conftest.py tests/test_cache.py tests/test_misc.py

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Files Coverage
src/lingpy 0.01% 87.62%
tests 98.86%
Project Totals (123 files) 89.28%
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