fepegar / torchio
Files Coverage
src/torchio/__init__.py 100.00%
src/torchio/cli/apply_transform.py 88.89%
src/torchio/cli/print_info.py 81.25%
src/torchio/constants.py 100.00%
src/torchio/data/__init__.py 100.00%
src/torchio/data/dataset.py 100.00%
src/torchio/data/image.py 88.92%
src/torchio/data/inference/__init__.py 100.00%
src/torchio/data/inference/aggregator.py 96.64%
src/torchio/data/io.py 92.23%
src/torchio/data/queue.py 96.03%
src/torchio/data/sampler/__init__.py 100.00%
src/torchio/data/sampler/grid.py 88.75%
src/torchio/data/sampler/label.py 93.94%
src/torchio/data/sampler/sampler.py 96.43%
src/torchio/data/sampler/uniform.py 93.75%
src/torchio/data/sampler/weighted.py 93.33%
src/torchio/data/subject.py 94.65%
src/torchio/datasets/__init__.py 100.00%
src/torchio/datasets/bite.py 41.82%
src/torchio/datasets/episurg.py 31.71%
src/torchio/datasets/fpg.py 40.63%
src/torchio/datasets/itk_snap/__init__.py 100.00%
src/torchio/datasets/itk_snap/itk_snap.py 50.00%
src/torchio/datasets/ixi.py 42.86%
src/torchio/datasets/medmnist.py 56.82%
src/torchio/datasets/mni/__init__.py 100.00%
src/torchio/datasets/mni/colin.py 33.33%
src/torchio/datasets/mni/icbm.py 26.32%
src/torchio/datasets/mni/mni.py 85.71%
src/torchio/datasets/mni/pediatric.py 28.95%
src/torchio/datasets/mni/sheep.py 30.77%
src/torchio/datasets/rsna_miccai.py 30.36%
src/torchio/datasets/rsna_spine_fracture.py 28.26%
src/torchio/datasets/slicer.py 52.94%
src/torchio/datasets/visible_human.py 62.16%
src/torchio/download.py 23.40%
src/torchio/external/due.py 68.00%
src/torchio/reference.py 100.00%
src/torchio/transforms/__init__.py 100.00%
src/torchio/transforms/augmentation/__init__.py 100.00%
src/torchio/transforms/augmentation/composition.py 91.36%
src/torchio/transforms/augmentation/intensity/__init__.py 100.00%
src/torchio/transforms/augmentation/intensity/random_bias_field.py 96.63%
src/torchio/transforms/augmentation/intensity/random_blur.py 100.00%
src/torchio/transforms/augmentation/intensity/random_gamma.py 96.30%
src/torchio/transforms/augmentation/intensity/random_ghosting.py 99.15%
src/torchio/transforms/augmentation/intensity/random_labels_to_image.py 97.21%
src/torchio/transforms/augmentation/intensity/random_motion.py 100.00%
src/torchio/transforms/augmentation/intensity/random_noise.py 98.15%
src/torchio/transforms/augmentation/intensity/random_spike.py 98.57%
src/torchio/transforms/augmentation/intensity/random_swap.py 96.58%
src/torchio/transforms/augmentation/random_transform.py 100.00%
src/torchio/transforms/augmentation/spatial/__init__.py 100.00%
src/torchio/transforms/augmentation/spatial/random_affine.py 96.57%
src/torchio/transforms/augmentation/spatial/random_anisotropy.py 93.75%
src/torchio/transforms/augmentation/spatial/random_elastic_deformation.py 100.00%
src/torchio/transforms/augmentation/spatial/random_flip.py 100.00%
src/torchio/transforms/data_parser.py 99.04%
src/torchio/transforms/fourier.py 62.96%
src/torchio/transforms/intensity_transform.py 100.00%
src/torchio/transforms/interpolation.py 90.00%
src/torchio/transforms/lambda_transform.py 100.00%
src/torchio/transforms/preprocessing/__init__.py 100.00%
src/torchio/transforms/preprocessing/intensity/__init__.py 100.00%
src/torchio/transforms/preprocessing/intensity/clamp.py 100.00%
src/torchio/transforms/preprocessing/intensity/histogram_standardization.py 95.00%
src/torchio/transforms/preprocessing/intensity/mask.py 100.00%
src/torchio/transforms/preprocessing/intensity/normalization_transform.py 93.33%
src/torchio/transforms/preprocessing/intensity/rescale.py 93.18%
src/torchio/transforms/preprocessing/intensity/z_normalization.py 100.00%
src/torchio/transforms/preprocessing/label/contour.py 100.00%
src/torchio/transforms/preprocessing/label/keep_largest_component.py 100.00%
src/torchio/transforms/preprocessing/label/label_transform.py 100.00%
src/torchio/transforms/preprocessing/label/one_hot.py 100.00%
src/torchio/transforms/preprocessing/label/remap_labels.py 100.00%
src/torchio/transforms/preprocessing/label/remove_labels.py 92.31%
src/torchio/transforms/preprocessing/label/sequential_labels.py 100.00%
src/torchio/transforms/preprocessing/spatial/bounds_transform.py 100.00%
src/torchio/transforms/preprocessing/spatial/copy_affine.py 100.00%
src/torchio/transforms/preprocessing/spatial/crop.py 100.00%
src/torchio/transforms/preprocessing/spatial/crop_or_pad.py 96.99%
src/torchio/transforms/preprocessing/spatial/ensure_shape_multiple.py 100.00%
src/torchio/transforms/preprocessing/spatial/pad.py 95.35%
src/torchio/transforms/preprocessing/spatial/resample.py 90.97%
src/torchio/transforms/preprocessing/spatial/resize.py 100.00%
src/torchio/transforms/preprocessing/spatial/to_canonical.py 100.00%
src/torchio/transforms/spatial_transform.py 100.00%
src/torchio/transforms/transform.py 94.39%
src/torchio/typing.py 100.00%
src/torchio/utils.py 75.77%
src/torchio/visualization.py 93.94%
Project Totals (92 files) 86.21%
Loading