fepegar / torchio

Compare 7d4e6f8 ... +0 ... 6dbe77b

90.55% ø ø

Overview Diff Coverage Changes Files Commits
Coverage Reach
torchio/transforms/augmentation/intensity/random_labels_to_image.py torchio/transforms/augmentation/intensity/random_motion.py torchio/transforms/augmentation/intensity/random_ghosting.py torchio/transforms/augmentation/intensity/random_swap.py torchio/transforms/augmentation/intensity/random_bias_field.py torchio/transforms/augmentation/intensity/random_spike.py torchio/transforms/augmentation/intensity/random_gamma.py torchio/transforms/augmentation/intensity/random_blur.py torchio/transforms/augmentation/intensity/random_noise.py torchio/transforms/augmentation/intensity/__init__.py torchio/transforms/augmentation/spatial/random_affine.py torchio/transforms/augmentation/spatial/random_elastic_deformation.py torchio/transforms/augmentation/spatial/random_flip.py torchio/transforms/augmentation/spatial/random_anisotropy.py torchio/transforms/augmentation/spatial/__init__.py torchio/transforms/augmentation/composition.py torchio/transforms/augmentation/random_transform.py torchio/transforms/augmentation/__init__.py torchio/transforms/preprocessing/spatial/resample.py torchio/transforms/preprocessing/spatial/crop_or_pad.py torchio/transforms/preprocessing/spatial/pad.py torchio/transforms/preprocessing/spatial/crop.py torchio/transforms/preprocessing/spatial/ensure_shape_multiple.py torchio/transforms/preprocessing/spatial/to_canonical.py torchio/transforms/preprocessing/spatial/bounds_transform.py torchio/transforms/preprocessing/intensity/histogram_standardization.py torchio/transforms/preprocessing/intensity/rescale.py torchio/transforms/preprocessing/intensity/z_normalization.py torchio/transforms/preprocessing/intensity/normalization_transform.py torchio/transforms/preprocessing/intensity/__init__.py torchio/transforms/preprocessing/label/remap_labels.py torchio/transforms/preprocessing/label/one_hot.py torchio/transforms/preprocessing/label/sequential_labels.py torchio/transforms/preprocessing/label/keep_largest_component.py torchio/transforms/preprocessing/label/remove_labels.py torchio/transforms/preprocessing/label/contour.py torchio/transforms/preprocessing/label/label_transform.py torchio/transforms/preprocessing/__init__.py torchio/transforms/transform.py torchio/transforms/data_parser.py torchio/transforms/__init__.py torchio/transforms/lambda_transform.py torchio/transforms/interpolation.py torchio/transforms/intensity_transform.py torchio/transforms/fourier.py torchio/transforms/spatial_transform.py torchio/data/image.py torchio/data/io.py torchio/data/sampler/weighted.py torchio/data/sampler/label.py torchio/data/sampler/sampler.py torchio/data/sampler/uniform.py torchio/data/sampler/__init__.py torchio/data/inference/aggregator.py torchio/data/inference/grid_sampler.py torchio/data/inference/__init__.py torchio/data/subject.py torchio/data/queue.py torchio/data/dataset.py torchio/data/__init__.py torchio/datasets/mni/icbm.py torchio/datasets/mni/colin.py torchio/datasets/mni/pediatric.py torchio/datasets/mni/sheep.py torchio/datasets/mni/__init__.py torchio/datasets/mni/mni.py torchio/datasets/ixi.py torchio/datasets/episurg.py torchio/datasets/bite.py torchio/datasets/itk_snap/itk_snap.py torchio/datasets/itk_snap/__init__.py torchio/datasets/fpg.py torchio/datasets/slicer.py torchio/datasets/__init__.py torchio/utils.py torchio/visualization.py torchio/download.py torchio/cli/apply_transform.py torchio/cli/print_info.py torchio/typing.py torchio/constants.py torchio/__init__.py torchio/reference.py tests/transforms/augmentation/test_random_labels_to_image.py tests/transforms/augmentation/test_random_affine.py tests/transforms/augmentation/test_random_ghosting.py tests/transforms/augmentation/test_random_elastic_deformation.py tests/transforms/augmentation/test_random_motion.py tests/transforms/augmentation/test_random_spike.py tests/transforms/augmentation/test_random_gamma.py tests/transforms/augmentation/test_random_noise.py tests/transforms/augmentation/test_random_blur.py tests/transforms/augmentation/test_random_anisotropy.py tests/transforms/augmentation/test_random_flip.py tests/transforms/augmentation/test_random_bias_field.py tests/transforms/augmentation/test_oneof.py tests/transforms/augmentation/test_random_swap.py tests/transforms/preprocessing/test_crop_pad.py tests/transforms/preprocessing/test_rescale.py tests/transforms/preprocessing/test_resample.py tests/transforms/preprocessing/test_histogram_standardization.py tests/transforms/preprocessing/test_ensure_shape_multiple.py tests/transforms/preprocessing/test_pad.py tests/transforms/preprocessing/test_z_normalization.py tests/transforms/preprocessing/test_to_canonical.py tests/transforms/preprocessing/test_crop.py tests/transforms/test_transforms.py tests/transforms/test_invertibility.py tests/transforms/label/test_remove_labels.py tests/transforms/label/test_sequential_labels.py tests/transforms/label/test_remap_labels.py tests/transforms/test_lambda_transform.py tests/transforms/test_collate.py tests/transforms/test_reproducibility.py tests/data/test_image.py tests/data/test_io.py tests/data/sampler/test_label_sampler.py tests/data/sampler/test_weighted_sampler.py tests/data/sampler/test_uniform_sampler.py tests/data/sampler/test_patch_sampler.py tests/data/sampler/test_random_sampler.py tests/data/inference/test_aggregator.py tests/data/inference/test_grid_sampler.py tests/data/inference/test_inference.py tests/data/test_subject.py tests/data/test_subjects_dataset.py tests/data/test_queue.py tests/utils.py tests/test_utils.py tests/test_cli.py tests/datasets/test_ixi.py print_system.py

No flags found

Use flags to group coverage reports by test type, project and/or folders.
Then setup custom commit statuses and notifications for each flag.

e.g., #unittest #integration

#production #enterprise

#frontend #backend

Learn more about Codecov Flags here.

1 untracked files changed.
Other files ignored by Codecov
docs/source/quickstart.rst has changed.

No tracked files changed.

Everything is accounted for!

No changes detected that need to be reviewed.
What changes does Codecov check for?
Lines, not adjusted in diff, that have changed coverage data.
Files that introduced coverage data that had none before.
Files that have missing coverage data that once were tracked.

2 Commits

90.55% ø ø
fixed typo in quickstart
DaGuT
#518 6dbe77b
CI Passed
Fernando Pérez-García
90.55% 28.57% -0.04%
Replace assert with try RuntimeError
fepegar
7d4e6f8
CI Passed
Files Coverage
__init__.py 100.00%
histogram_standardization.py 94.66%
normalization_transform.py 93.33%
rescale.py 92.11%
z_normalization.py 100.00%
Folder Totals (5 files) 94.76%
Project Totals (132 files) 90.55%
Loading