@@ -297,7 +297,7 @@
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297 297
        connected: boolean
298 298
            True if atom2 is a direct neighbor or atom1
299 299
        """
300 -
        if not isinstance(atom2, oechem.OEAtomBase):
300 +
        if not isinstance(atom2.atom, oechem.OEAtomBase):
301 301
            return False
302 302
        return self.atom.IsConnected(atom2.atom)
303 303
@@ -329,7 +329,7 @@
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329 329
            molecule this atom is stored in
330 330
        """
331 331
        mol = oechem.OEMol(self.atom.GetParent())
332 -
        self.atom = mol.GetAtom(oechem.OEHasAtomIdx(self._index))
332 +
        self.atom = mol.GetAtom(oechem.OEHasAtomIdx(self._idx))
333 333
        return Mol(mol)
334 334
335 335
# =======================================

@@ -689,7 +689,6 @@
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689 689
                # sum up score for every entry in the atom and storage set
690 690
                score = 0
691 691
                for sa, a in zip(storage_set, atom_set):
692 -
                    print(a)
693 692
                    if isinstance(sa, self.BondStorage):
694 693
                        score += sa.compare_bond(a)
695 694
                    else:
Files Coverage
chemper 89.40%
Project Totals (11 files) 89.40%
577.4
TRAVIS_PYTHON_VERSION=3.6
TRAVIS_OS_NAME=linux
577.3
TRAVIS_OS_NAME=linux
577.2
TRAVIS_OS_NAME=osx
577.6
TRAVIS_PYTHON_VERSION=3.6
TRAVIS_OS_NAME=linux
pcte8didoln9uk0f
577.1
TRAVIS_OS_NAME=osx
577.5
TRAVIS_OS_NAME=osx
577.7
TRAVIS_PYTHON_VERSION=3.6
TRAVIS_OS_NAME=linux
s2oij28l7cu65hn8
1
coverage:
2
  ignore:
3
    - test/.*
4
    - compare/.*
5
    - test_helper.py
6
    - setup.py
7
  status:
8
    patch: false
9
    project:
10
      default:
11
        threshold: 80%
12
comment:
13
  layout: "header"
14
  require_changes: false
15
  branches: null
16
  behavior: default
17
  flags: null
18
  paths: null
Sunburst
The inner-most circle is the entire project, moving away from the center are folders then, finally, a single file. The size and color of each slice is representing the number of statements and the coverage, respectively.
Icicle
The top section represents the entire project. Proceeding with folders and finally individual files. The size and color of each slice is representing the number of statements and the coverage, respectively.
Grid
Each block represents a single file in the project. The size and color of each block is represented by the number of statements and the coverage, respectively.
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