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###########################################################################/**
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# @RdocDefault compileSweave
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#
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# @title "Compiles a Sweave file"
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#
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# \description{
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# @get "title".
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# }
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#
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# @synopsis
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#
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# \arguments{
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# \item{filename, path}{The filename and (optional) path of the
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# Sweave document to be compiled.}
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# \item{...}{Additional arguments passed to @see "compileLaTeX".}
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# \item{outPath}{The output and working directory.}
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# \item{postprocess}{If @TRUE, and a postprocessing method exists for
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# the generated product, it is postprocessed as well.}
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# \item{verbose}{See @see "R.utils::Verbose".}
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# }
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#
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# \value{
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# Returns the pathname of the generated document.
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# }
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#
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# @author
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#
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# \seealso{
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# Internally, @see "utils::Sweave" is used.
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# }
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#
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# @keyword file
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# @keyword IO
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# @keyword internal
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#*/###########################################################################
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setMethodS3("compileSweave", "default", function(filename, path=NULL, ..., outPath=".", postprocess=TRUE, verbose=FALSE) {
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# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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# Validate arguments
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# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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# Arguments 'filename' & 'path':
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pathname <- if (is.null(path)) filename else file.path(path, filename)
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if (!isUrl(pathname)) {
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pathname <- Arguments$getReadablePathname(pathname)
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}
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# Arguments 'outPath':
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outPath <- Arguments$getWritablePath(outPath)
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if (is.null(outPath)) outPath <- "."
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# Argument 'verbose':
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verbose <- Arguments$getVerbose(verbose)
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if (verbose) {
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pushState(verbose)
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on.exit(popState(verbose))
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}
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verbose && enter(verbose, "Compiling Sweave document")
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# Download URL?
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if (isUrl(pathname)) {
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verbose && enter(verbose, "Downloading URL")
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url <- pathname
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verbose && cat(verbose, "URL: ", url)
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pathname <- downloadFile(url, verbose=less(verbose,50))
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verbose && cat(verbose, "Local file: ", pathname)
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verbose && exit(verbose)
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}
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pathname <- getAbsolutePath(pathname)
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verbose && cat(verbose, "Sweave pathname (absolute): ", pathname)
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verbose && printf(verbose, "Input file size: %g bytes\n", file.info(pathname)$size)
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verbose && cat(verbose, "Output and working directory: ", outPath)
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opwd <- "."
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on.exit(setwd(opwd), add=TRUE)
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if (!is.null(outPath)) {
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opwd <- setwd(outPath)
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}
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pathname2 <- Sweave(pathname)
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pathname2 <- getAbsolutePath(pathname2)
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setwd(opwd); opwd <- "."
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res <- RspFileProduct(pathname2)
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verbose && print(verbose, res)
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# Postprocess?
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if (postprocess) {
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res <- process(res, outPath=outPath, recursive=TRUE, verbose=verbose)
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}
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verbose && exit(verbose)
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res
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}) # compileSweave()
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HenrikBengtsson