.gitattributes COPYING MANIFEST.in docs/Makefile docs/make.bat docs/source/_static/css/main.css docs/source/_static/js/apitoc.js docs/source/_static/js/example-admonition.js docs/source/_templates/summary.rst docs/source/about.rst docs/source/api.rst docs/source/api/warnings.rst docs/source/conf.py docs/source/examples/index.rst docs/source/examples/ms.ipynb docs/source/index.rst docs/source/install.rst docs/source/todo.rst docs/source/updating.rst pronto/__init__.py pronto/definition.py pronto/entity/__init__.py pronto/entity/attributes.py pronto/logic/__init__.py pronto/logic/lineage.py pronto/metadata.py pronto/ontology.py pronto/parsers/__init__.py pronto/parsers/_fastobo.py pronto/parsers/base.py pronto/parsers/obo.py pronto/parsers/obojson.py pronto/parsers/rdfxml.py pronto/pv.py pronto/py.typed pronto/relationship.py pronto/serializers/__init__.py pronto/serializers/_fastobo.py pronto/serializers/base.py pronto/serializers/obo.py pronto/serializers/obojson.py pronto/synonym.py pronto/term.py pronto/utils/__init__.py pronto/utils/io.py pronto/utils/iter.py pronto/utils/meta.py pronto/utils/warnings.py pronto/xref.py setup.cfg setup.py tests/__init__.py tests/data/aeo.owl tests/data/cio.obo tests/data/go-basic.owl tests/data/go.obo tests/data/hp.obo tests/data/iao.owl tests/data/imagingMS.obo tests/data/mp.obo tests/data/ms.obo tests/data/obographs/abox.json tests/data/obographs/basic.json tests/data/obographs/equivNodeSetTest.json tests/data/obographs/nucleus.json tests/data/obographs/obsoletion_example.json tests/data/owen-jones-gen.obo tests/data/pato.obo tests/data/plana.obo tests/data/uo.obo tests/data/winni-genp.obo tests/test_def.py tests/test_doctest.py tests/test_documentation.py tests/test_entity.py tests/test_issues.py tests/test_logic/__init__.py tests/test_logic/test_lineage.py tests/test_ontology.py tests/test_parser/__init__.py tests/test_parser/test_obojson.py tests/test_parser/test_rdfxml.py tests/test_pv.py tests/test_relationship.py tests/test_serializer/__init__.py tests/test_serializer/base.py tests/test_serializer/test_obo.py tests/test_synonym.py tests/test_term.py tests/test_xref.py tests/utils.py <<<<<< network # path=./coverage.xml /home/runner/work/pronto/pronto/pronto <<<<<< EOF