TRAVIS_PYTHON_VERSION=3.7 TRAVIS_OS_NAME=linux <<<<<< ENV .gitignore .travis.yml LICENSE.txt MANIFEST.in README.md bacphlip/__init__.py bacphlip/bacphlip.py bacphlip/command_line.py bacphlip/data/example_data/genome_example.fasta bacphlip/data/example_data/genome_example.fasta.6frame bacphlip/data/example_data/genome_example.fasta.bacphlip bacphlip/data/example_data/genome_example.fasta.hmmsearch bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv bacphlip/data/example_data/genome_example_2.fasta bacphlip/data/example_data/genome_example_2.fasta.6frame bacphlip/data/example_data/genome_example_2.fasta.bacphlip bacphlip/data/example_data/genome_example_2.fasta.hmmsearch bacphlip/data/example_data/genome_example_2.fasta.hmmsearch.tsv bacphlip/data/example_data/multi_example.fasta bacphlip/data/example_data/multi_example.fasta.BACPHLIP_DIR/NC_001416.1.6frame bacphlip/data/example_data/multi_example.fasta.BACPHLIP_DIR/NC_001416.1.hmmsearch bacphlip/data/example_data/multi_example.fasta.BACPHLIP_DIR/NC_001416.1.hmmsearch.tsv bacphlip/data/example_data/multi_example.fasta.BACPHLIP_DIR/NC_001604.1.6frame bacphlip/data/example_data/multi_example.fasta.BACPHLIP_DIR/NC_001604.1.hmmsearch bacphlip/data/example_data/multi_example.fasta.BACPHLIP_DIR/NC_001604.1.hmmsearch.tsv bacphlip/data/example_data/multi_example.fasta.bacphlip bacphlip/data/example_data/multi_example.fasta.hmmsearch.tsv bacphlip/data/prot_models.hmm bacphlip/data/rf_best.joblib codecov.yml pytest.ini setup.cfg setup.py tests/test_all.py <<<<<< network # path=/home/travis/build/adamhockenberry/bacphlip/coverage.xml /home/travis/build/adamhockenberry/bacphlip <<<<<< EOF